Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Interphase (GO:0051325) Genes Targeted by hsa-mir-338-5p in AD Lung Bhattacharjee Cluster 0 Table contains all genes in the AD Lung Bhattacharjee cluster number 0. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-338-5p GO:0051325 2356 FPGS folylpolyglutamate synthase [Source:HGNC Symbol;Acc:3824] zzz999 286148 DPY19L4 dpy-19-like 4 (C. elegans) [Source:HGNC Symbol;Acc:27829] zzz999 23279 NUP160 nucleoporin 160kDa [Source:HGNC Symbol;Acc:18017] T 6712 SPTBN2 spectrin, beta, non-erythrocytic 2 [Source:HGNC Symbol;Acc:11276] zzz999 8890 EIF2B4 eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa [Source:HGNC Symbol;Acc:3260] zzz999 57154 SMURF1 SMAD specific E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:16807] zzz999 8936 WASF1 WAS protein family, member 1 [Source:HGNC Symbol;Acc:12732] P T 261726 TIPRL TIP41, TOR signaling pathway regulator-like (S. cerevisiae) [Source:HGNC Symbol;Acc:30231] zzz999 8774 NAPG N-ethylmaleimide-sensitive factor attachment protein, gamma [Source:HGNC Symbol;Acc:7642] zzz999 80308 FLAD1 FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:24671] zzz999 400 ARL1 ADP-ribosylation factor-like 1 [Source:HGNC Symbol;Acc:692] T 23518 R3HDM1 R3H domain containing 1 [Source:HGNC Symbol;Acc:9757] T 9456 HOMER1 homer homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:17512] P T 5910 RAP1GDS1 RAP1, GTP-GDP dissociation stimulator 1 [Source:HGNC Symbol;Acc:9859] zzz999 164 AP1G1 adaptor-related protein complex 1, gamma 1 subunit [Source:HGNC Symbol;Acc:555] P T 8801 SUCLG2 succinate-CoA ligase, GDP-forming, beta subunit [Source:HGNC Symbol;Acc:11450] T 6241 RRM2 ribonucleotide reductase M2 [Source:HGNC Symbol;Acc:10452] T Yes 9801 MRPL19 mitochondrial ribosomal protein L19 [Source:HGNC Symbol;Acc:14052] T 9787 DLGAP5 discs, large (Drosophila) homolog-associated protein 5 [Source:HGNC Symbol;Acc:16864] zzz999 23397 NCAPH non-SMC condensin I complex, subunit H [Source:HGNC Symbol;Acc:1112] zzz999 2768 GNA12 guanine nucleotide binding protein (G protein) alpha 12 [Source:HGNC Symbol;Acc:4380] T 1503 CTPS CTP synthase [Source:HGNC Symbol;Acc:2519] zzz999 7019 TFAM transcription factor A, mitochondrial [Source:HGNC Symbol;Acc:11741] zzz999 55832 CAND1 cullin-associated and neddylation-dissociated 1 [Source:HGNC Symbol;Acc:30688] P T 10776 ARPP19 cAMP-regulated phosphoprotein, 19kDa [Source:HGNC Symbol;Acc:16967] T 56902 PNO1 partner of NOB1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:32790] zzz999 3093 UBE2K ubiquitin-conjugating enzyme E2K (UBC1 homolog, yeast) [Source:HGNC Symbol;Acc:4914] T 81611 ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:HGNC Symbol;Acc:16673] P T 11051 NUDT21 nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Source:HGNC Symbol;Acc:13870] zzz999 641 BLM Bloom syndrome, RecQ helicase-like [Source:HGNC Symbol;Acc:1058] zzz999 Yes 23438 HARS2 histidyl-tRNA synthetase 2, mitochondrial (putative) [Source:HGNC Symbol;Acc:4817] zzz999 10153 CEBPZ CCAAT/enhancer binding protein (C/EBP), zeta [Source:HGNC Symbol;Acc:24218] zzz999 29889 GNL2 guanine nucleotide binding protein-like 2 (nucleolar) [Source:HGNC Symbol;Acc:29925] zzz999 699 BUB1 budding uninhibited by benzimidazoles 1 homolog (yeast) [Source:HGNC Symbol;Acc:1148] zzz999 954 ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 [Source:HGNC Symbol;Acc:3364] zzz999 8914 TIMELESS timeless homolog (Drosophila) [Source:HGNC Symbol;Acc:11813] zzz999 Yes 2960 GTF2E1 general transcription factor IIE, polypeptide 1, alpha 56kDa [Source:HGNC Symbol;Acc:4650] T 5983 RFC3 replication factor C (activator 1) 3, 38kDa [Source:HGNC Symbol;Acc:9971] T Yes 4862 NPAS2 neuronal PAS domain protein 2 [Source:HGNC Symbol;Acc:7895] zzz999 58500 ZNF250 zinc finger protein 250 [Source:HGNC Symbol;Acc:13044] T 27067 STAU2 staufen, RNA binding protein, homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:11371] P T 7637 ZNF84 Zinc finger protein 84 [Source:UniProtKB/Swiss-Prot;Acc:P51523] zzz999 51430 C1orf9 chromosome 1 open reading frame 9 [Source:HGNC Symbol;Acc:1240] zzz999 6491 STIL SCL/TAL1 interrupting locus [Source:HGNC Symbol;Acc:10879] zzz999 23306 TMEM194A transmembrane protein 194A [Source:HGNC Symbol;Acc:29001] zzz999 7291 TWIST1 twist homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:12428] zzz999 995 CDC25C cell division cycle 25 homolog C (S. pombe) [Source:HGNC Symbol;Acc:1727] zzz999 Yes 9156 EXO1 exonuclease 1 [Source:HGNC Symbol;Acc:3511] zzz999 9585 KIF20B kinesin family member 20B [Source:HGNC Symbol;Acc:7212] T 115353 LRRC42 leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:28792] zzz999 1810 DR1 down-regulator of transcription 1, TBP-binding (negative cofactor 2) [Source:HGNC Symbol;Acc:3017] T 7479 WNT8B wingless-type MMTV integration site family, member 8B [Source:HGNC Symbol;Acc:12789] zzz999 9493 KIF23 kinesin family member 23 [Source:HGNC Symbol;Acc:6392] zzz999 2650 GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 [Source:HGNC Symbol;Acc:4203] zzz999 3607 FOXK2 forkhead box K2 [Source:HGNC Symbol;Acc:6036] zzz999 1824 DSC2 desmocollin 2 [Source:HGNC Symbol;Acc:3036] T 1032 CDKN2D cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) [Source:HGNC Symbol;Acc:1790] zzz999 Yes 6787 NEK4 NIMA (never in mitosis gene a)-related kinase 4 [Source:HGNC Symbol;Acc:11399] T 1134 CHRNA1 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:HGNC Symbol;Acc:1955] zzz999 7247 TSN translin [Source:HGNC Symbol;Acc:12379] zzz999 5553 PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) [Source:HGNC Symbol;Acc:9362] zzz999 6880 TAF9 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa [Source:HGNC Symbol;Acc:11542] zzz999 10926 DBF4 DBF4 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:17364] T Yes 7443 VRK1 vaccinia related kinase 1 [Source:HGNC Symbol;Acc:12718] zzz999 8726 EED embryonic ectoderm development [Source:HGNC Symbol;Acc:3188] zzz999 83737 ITCH itchy E3 ubiquitin protein ligase homolog (mouse) [Source:HGNC Symbol;Acc:13890] P T 5427 POLE2 polymerase (DNA directed), epsilon 2 (p59 subunit) [Source:HGNC Symbol;Acc:9178] zzz999 Yes 5636 PRPSAP2 phosphoribosyl pyrophosphate synthetase-associated protein 2 [Source:HGNC Symbol;Acc:9467] zzz999 6059 ABCE1 ATP-binding cassette, sub-family E (OABP), member 1 [Source:HGNC Symbol;Acc:69] zzz999 56061 UBFD1 ubiquitin family domain containing 1 [Source:HGNC Symbol;Acc:30565] zzz999 2591 GALNT3 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3) [Source:HGNC Symbol;Acc:4125] T 4976 OPA1 optic atrophy 1 (autosomal dominant) [Source:HGNC Symbol;Acc:8140] T 7468 WHSC1 Wolf-Hirschhorn syndrome candidate 1 [Source:HGNC Symbol;Acc:12766] T 10615 SPAG5 sperm associated antigen 5 [Source:HGNC Symbol;Acc:13452] zzz999 8893 EIF2B5 eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa [Source:HGNC Symbol;Acc:3261] zzz999 2597 GAPDH glyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:4141] zzz999 22984 PDCD11 programmed cell death 11 [Source:HGNC Symbol;Acc:13408] zzz999 7298 TYMS thymidylate synthetase [Source:HGNC Symbol;Acc:12441] T Yes 8690 JRKL jerky homolog-like (mouse) [Source:HGNC Symbol;Acc:6200] T 2891 GRIA2 glutamate receptor, ionotropic, AMPA 2 [Source:HGNC Symbol;Acc:4572] P T 97 ACYP1 acylphosphatase 1, erythrocyte (common) type [Source:HGNC Symbol;Acc:179] zzz999 10084 PQBP1 polyglutamine binding protein 1 [Source:HGNC Symbol;Acc:9330] zzz999 4744 NEFH neurofilament, heavy polypeptide [Source:HGNC Symbol;Acc:7737] zzz999 7553 ZNF7 zinc finger protein 7 [Source:HGNC Symbol;Acc:13139] zzz999 6683 SPAST spastin [Source:HGNC Symbol;Acc:11233] P T 24140 FTSJ1 FtsJ homolog 1 (E. coli) [Source:HGNC Symbol;Acc:13254] zzz999 10196 PRMT3 protein arginine methyltransferase 3 [Source:HGNC Symbol;Acc:30163] zzz999 9134 CCNE2 cyclin E2 [Source:HGNC Symbol;Acc:1590] zzz999 Yes 7748 ZNF195 zinc finger protein 195 [Source:HGNC Symbol;Acc:12986] zzz999 3416 IDE insulin-degrading enzyme [Source:HGNC Symbol;Acc:5381] zzz999 55215 FANCI Fanconi anemia, complementation group I [Source:HGNC Symbol;Acc:25568] zzz999 6999 TDO2 tryptophan 2,3-dioxygenase [Source:HGNC Symbol;Acc:11708] T 22858 ICK intestinal cell (MAK-like) kinase [Source:HGNC Symbol;Acc:21219] zzz999 11183 MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 [Source:HGNC Symbol;Acc:6867] zzz999 8161 COIL coilin [Source:HGNC Symbol;Acc:2184] T 11129 CLASRP CLK4-associating serine/arginine rich protein [Source:HGNC Symbol;Acc:17731] zzz999 10793 ZNF273 zinc finger protein 273 [Source:HGNC Symbol;Acc:13067] T 8792 TNFRSF11A tumor necrosis factor receptor superfamily, member 11a, NFKB activator [Source:HGNC Symbol;Acc:11908] zzz999 10447 FAM3C family with sequence similarity 3, member C [Source:HGNC Symbol;Acc:18664] zzz999 875 CBS cystathionine-beta-synthase [Source:HGNC Symbol;Acc:1550] zzz999 5502 PPP1R1A protein phosphatase 1, regulatory (inhibitor) subunit 1A [Source:HGNC Symbol;Acc:9286] zzz999 6947 TCN1 transcobalamin I (vitamin B12 binding protein, R binder family) [Source:HGNC Symbol;Acc:11652] zzz999 836 CASP3 caspase 3, apoptosis-related cysteine peptidase [Source:HGNC Symbol;Acc:1504] zzz999 399979 SNX19 sorting nexin 19 [Source:HGNC Symbol;Acc:21532] zzz999 4116 MAGOH mago-nashi homolog, proliferation-associated (Drosophila) [Source:HGNC Symbol;Acc:6815] zzz999 10485 C1orf61 chromosome 1 open reading frame 61 [Source:HGNC Symbol;Acc:30780] zzz999 9532 BAG2 BCL2-associated athanogene 2 [Source:HGNC Symbol;Acc:938] T 5867 RAB4A RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:9781] zzz999 136 ADORA2B adenosine A2b receptor [Source:HGNC Symbol;Acc:264] zzz999 8087 FXR1 fragile X mental retardation, autosomal homolog 1 [Source:HGNC Symbol;Acc:4023] zzz999 10254 STAM2 signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 [Source:HGNC Symbol;Acc:11358] zzz999 6617 SNAPC1 small nuclear RNA activating complex, polypeptide 1, 43kDa [Source:HGNC Symbol;Acc:11134] T 10278 EFS embryonal Fyn-associated substrate [Source:HGNC Symbol;Acc:16898] T 5062 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 [Source:HGNC Symbol;Acc:8591] T 10150 MBNL2 muscleblind-like 2 (Drosophila) [Source:HGNC Symbol;Acc:16746] P T 11073 TOPBP1 topoisomerase (DNA) II binding protein 1 [Source:HGNC Symbol;Acc:17008] zzz999 5985 RFC5 replication factor C (activator 1) 5, 36.5kDa [Source:HGNC Symbol;Acc:9973] zzz999 Yes 24149 ZNF318 zinc finger protein 318 [Source:HGNC Symbol;Acc:13578] zzz999 84516 DCTN5 dynactin 5 (p25) [Source:HGNC Symbol;Acc:24594] zzz999 5433 POLR2D polymerase (RNA) II (DNA directed) polypeptide D [Source:HGNC Symbol;Acc:9191] zzz999 6936 C2orf3 chromosome 2 open reading frame 3 [Source:HGNC Symbol;Acc:1317] T 6634 SNRPD3 Small nuclear ribonucleoprotein Sm D3 [Source:UniProtKB/Swiss-Prot;Acc:P62318] zzz999 4751 NEK2 NIMA (never in mitosis gene a)-related kinase 2 [Source:HGNC Symbol;Acc:7745] T Yes 6372 CXCL6 chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2) [Source:HGNC Symbol;Acc:10643] T 11200 CHEK2 CHK2 checkpoint homolog (S. pombe) [Source:HGNC Symbol;Acc:16627] zzz999 2530 FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) [Source:HGNC Symbol;Acc:4019] P T 2071 ERCC3 excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing) [Source:HGNC Symbol;Acc:3435] zzz999 93081 C13orf27 chromosome 13 open reading frame 27 [Source:HGNC Symbol;Acc:25188] zzz999 8634 RTCD1 RNA terminal phosphate cyclase domain 1 [Source:HGNC Symbol;Acc:17981] zzz999 4361 MRE11A MRE11 meiotic recombination 11 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:7230] T 84733 CBX2 chromobox homolog 2 [Source:HGNC Symbol;Acc:1552] zzz999 5003 SLC22A18AS solute carrier family 22 (organic cation transporter), member 18 antisense [Source:HGNC Symbol;Acc:10965] zzz999 10966 RAB40B RAB40B, member RAS oncogene family [Source:HGNC Symbol;Acc:18284] zzz999 9650 MTFR1 mitochondrial fission regulator 1 [Source:HGNC Symbol;Acc:29510] zzz999 6873 TAF2 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa [Source:HGNC Symbol;Acc:11536] T Yes 157769 FAM91A1 family with sequence similarity 91, member A1 [Source:HGNC Symbol;Acc:26306] P T 9477 MED20 mediator complex subunit 20 [Source:HGNC Symbol;Acc:16840] zzz999 10557 RPP38 ribonuclease P/MRP 38kDa subunit [Source:HGNC Symbol;Acc:30329] zzz999 26278 SACS spastic ataxia of Charlevoix-Saguenay (sacsin) [Source:HGNC Symbol;Acc:10519] zzz999 7159 TP53BP2 tumor protein p53 binding protein, 2 [Source:HGNC Symbol;Acc:12000] T 10466 COG5 component of oligomeric golgi complex 5 [Source:HGNC Symbol;Acc:14857] T 10302 SNAPC5 small nuclear RNA activating complex, polypeptide 5, 19kDa [Source:HGNC Symbol;Acc:15484] zzz999 10556 RPP30 ribonuclease P/MRP 30kDa subunit [Source:HGNC Symbol;Acc:17688] T 5378 PMS1 PMS1 postmeiotic segregation increased 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:9121] T 9833 MELK maternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:16870] zzz999 84864 MINA MYC induced nuclear antigen [Source:HGNC Symbol;Acc:19441] zzz999 10623 POLR3C polymerase (RNA) III (DNA directed) polypeptide C (62kD) [Source:HGNC Symbol;Acc:30076] zzz999 9360 PPIG peptidylprolyl isomerase G (cyclophilin G) [Source:HGNC Symbol;Acc:14650] zzz999 9781 RNF144A ring finger protein 144A [Source:HGNC Symbol;Acc:20457] T 10954 PDIA5 protein disulfide isomerase family A, member 5 [Source:HGNC Symbol;Acc:24811] zzz999 4719 NDUFS1 NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase) [Source:HGNC Symbol;Acc:7707] zzz999 3799 KIF5B kinesin family member 5B [Source:HGNC Symbol;Acc:6324] zzz999 8318 CDC45 cell division cycle 45 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:1739] zzz999 Yes 7326 UBE2G1 ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, yeast) [Source:HGNC Symbol;Acc:12482] T 3796 KIF2A kinesin heavy chain member 2A [Source:HGNC Symbol;Acc:6318] zzz999 3939 LDHA lactate dehydrogenase A [Source:HGNC Symbol;Acc:6535] zzz999 5828 PEX2 peroxisomal biogenesis factor 2 [Source:HGNC Symbol;Acc:9717] T 11157 LSM6 LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Source:HGNC Symbol;Acc:17017] T 3396 ICT1 immature colon carcinoma transcript 1 [Source:HGNC Symbol;Acc:5359] zzz999 5001 ORC5 origin recognition complex, subunit 5 [Source:HGNC Symbol;Acc:8491] zzz999 Yes 5495 PPM1B protein phosphatase, Mg2+/Mn2+ dependent, 1B [Source:HGNC Symbol;Acc:9276] P T 9410 SNRNP40 small nuclear ribonucleoprotein 40kDa (U5) [Source:HGNC Symbol;Acc:30857] zzz999 4528 MTIF2 mitochondrial translational initiation factor 2 [Source:HGNC Symbol;Acc:7441] zzz999 4085 MAD2L1 MAD2 mitotic arrest deficient-like 1 (yeast) [Source:HGNC Symbol;Acc:6763] zzz999 892 CCNC cyclin C [Source:HGNC Symbol;Acc:1581] zzz999 900 CCNG1 cyclin G1 [Source:HGNC Symbol;Acc:1592] T Yes 6874 TAF4 TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa [Source:HGNC Symbol;Acc:11537] P T 91369 ANKRD40 ankyrin repeat domain 40 [Source:HGNC Symbol;Acc:28233] zzz999 10308 ZNF267 zinc finger protein 267 [Source:HGNC Symbol;Acc:13060] zzz999 8880 FUBP1 far upstream element (FUSE) binding protein 1 [Source:HGNC Symbol;Acc:4004] T 1737 DLAT dihydrolipoamide S-acetyltransferase [Source:HGNC Symbol;Acc:2896] P T 4090 SMAD5 SMAD family member 5 [Source:HGNC Symbol;Acc:6771] P T 6895 TARBP2 TAR (HIV-1) RNA binding protein 2 [Source:HGNC Symbol;Acc:11569] zzz999 9735 KNTC1 kinetochore associated 1 [Source:HGNC Symbol;Acc:17255] zzz999 6861 SYT5 synaptotagmin V [Source:HGNC Symbol;Acc:11513] zzz999 10036 CHAF1A chromatin assembly factor 1, subunit A (p150) [Source:HGNC Symbol;Acc:1910] zzz999

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